Publications

Bioinformatics (Oxford, England). 2012-03-01; 28.5: 726-8.

nEASE: a method for gene ontology subclassification of high-throughput gene expression data

Chittenden TW, Howe EA, Taylor JM, Mar JC, Aryee MJ, G贸mez H, Sultana R, Braisted J, Nair SJ, Quackenbush J, Holmes C

PMID: 22247278

Influenza and other respiratory viruses. 2012-03-01; 6.2: 142-52, e1-5.

Improving influenza vaccine virus selection: report of a WHO informal consultation held at WHO headquarters, Geneva, Switzerland, 14-16 June 2010

Ampofo WK, Bachtiar NS, Bakamutumaho B, Barr I, Baylor N, Bedford T, Bernat J, Blayer S, Bourrier M, Boye CS, Bresee J, Broberg E, Brytting M, Bucher D, Cassels FJ, Cebedzic R, Chadha M, Chittakanpitch M, Cobey S, Colegate T, Costa JA, Cox NJ, Daves S, Do MH, Diep Ldo T, Edwards S, Eichelberger M, El Aouad R, El Kholy N, Engelhardt O, Fathalla F, Ferguson N, Franks J, Giovanni MY, Gog J, Grohmann G, Gupta S, Hachid A, Hay A, Heraud JM, Hidayati N, Howard K, Huang S, Hungnes O, Jernigan D, Kadjo H, Kang C, Katz J, Kelso A, Kiselev OI, Kistner O, Kullabutr K, Lambert L, Le M, Leung-Tack P, Levandowski R, Li Y, Lim W, Locher OK, L贸pez-Mart铆nez I, Louwerens J, Maharani, McCauley J, Mefed K, Miller JD, Mishra AC, Mokhtari-Azad T, Monto A, Nelson K, Nelson M, Neumeier E, Njouom R, Ochieng WO, Odagiri T, Paiva TM, Pechirra P, Poon L, Prosenc K, Rambaut A, Riayati EE, Rimmelzwaan G, Russell C, Salisbury D, Sampurno OD, Savy V, Schoofs P, Schweiger B, Selleck P, Shaw M, Shay D, Sheibani A, Siqueira M, Slim A, Smith D, Spiro D, Stevens J, Sturm-Ramirez KM, Tada Y, Takizawa K, Tashiro M, Taylor B, Thomas Y, Van der Werf S, Waddell AL, Wang D, Webby R, Weber S, Weir JP, Win N, Wood J, Wu A, Zahoor Zaidi SS, Zambon M

PMID: 21819547

Proceedings of the National Academy of Sciences of the United States of America. 2012-02-07; 109.6: E317-25.

Comparative metatranscriptomics identifies molecular bases for the physiological responses of phytoplankton to varying iron availability

Marchetti A, Schruth DM, Durkin CA, Parker MS, Kodner RB, Berthiaume CT, Morales R, Allen AE, Armbrust EV

PMID: 22308424

Parasite immunology. 2012-02-01; 34.2-3: 121-9.

Filarial and Wolbachia genomics

Scott AL, Ghedin E, Nutman TB, McReynolds LA, Poole CB, Slatko BE, Foster JM

PMID: 22098559

Nucleic acids research. 2012-02-01; 40.3: 1307-17.

Clustering RNA structural motifs in ribosomal RNAs using secondary structural alignment

Zhong C, Zhang S

PMID: 21976732

Environmental microbiology. 2012-02-01; 14.2: 387-404.

Massive dominance of Epsilonproteobacteria in formation waters from a Canadian oil sands reservoir containing severely biodegraded oil

Hubert CR, Oldenburg TB, Fustic M, Gray ND, Larter SR, Penn K, Rowan AK, Seshadri R, Sherry A, Swainsbury R, Voordouw G, Voordouw JK, Head IM

PMID: 21824242

ACS synthetic biology. 2012-01-20; 1.1: 22-8.

Cloning the Acholeplasma laidlawii PG-8A genome in Saccharomyces cerevisiae as a yeast centromeric plasmid

Karas BJ, Tagwerker C, Yonemoto IT, Hutchison CA, Smith HO

PMID: 23651007

Journal of the American Chemical Society. 2012-01-11; 134.1: 305-14.

AirSR, a [2Fe-2S] cluster-containing two-component system, mediates global oxygen sensing and redox signaling in Staphylococcus aureus

Sun F, Ji Q, Jones MB, Deng X, Liang H, Frank B, Telser J, Peterson SN, Bae T, He C

PMID: 22122613

PloS one. 2012-01-01; 7.5: e32219.

Identifying low pH active and lactate-utilizing taxa within oral microbiome communities from healthy children using stable isotope probing techniques

McLean JS, Fansler SJ, Majors PD, McAteer K, Allen LZ, Shirtliff ME, Lux R, Shi W

PMID: 22403637

Methods in molecular biology (Clifton, N.J.). 2012-01-01; 944.35-55.

From bacterial to microbial ecosystems (metagenomics)

Williamson SJ, Yooseph S

PMID: 22144147

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