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Publications

PloS one. 2013-01-01; 8.12: e62216.
Improved method for linear B-cell epitope prediction using antigen's primary sequence
Singh H, Ansari HR, Raghava GP
PMID: 23667458
Natural product reports. 2013-01-01; 30.1: 108-60.
Ribosomally synthesized and post-translationally modified peptide natural products: overview and recommendations for a universal nomenclature
Arnison PG, Bibb MJ, Bierbaum G, Bowers AA, Bugni TS, Bulaj G, Camarero JA, Campopiano DJ, Challis GL, Clardy J, Cotter PD, Craik DJ, Dawson M, Dittmann E, Donadio S, Dorrestein PC, Entian KD, Fischbach MA, Garavelli JS, Göransson U, Gruber CW, Haft DH, Hemscheidt TK, Hertweck C, Hill C, Horswill AR, Jaspars M, Kelly WL, Klinman JP, Kuipers OP, Link AJ, Liu W, Marahiel MA, Mitchell DA, Moll GN, Moore BS, Müller R, Nair SK, Nes IF, Norris GE, Olivera BM, Onaka H, Patchett ML, Piel J, Reaney MJ, Rebuffat S, Ross RP, Sahl HG, Schmidt EW, Selsted ME, Severinov K, Shen B, Sivonen K, Smith L, Stein T, Süssmuth RD, Tagg JR, Tang GL, Truman AW, Vederas JC, Walsh CT, Walton JD, Wenzel SC, Willey JM, van der Donk WA
PMID: 23165928
Oral surgery, oral medicine, oral pathology and oral radiology. 2013-01-01; 115.1: 71-8.
Electrically conductive bacterial nanowires in bisphosphonate-related osteonecrosis of the jaw biofilms
Wanger G, Gorby Y, El-Naggar MY, Yuzvinsky TD, Schaudinn C, Gorur A, Sedghizadeh PP
PMID: 23217537
Nucleic acids research. 2013-01-01; 41.Database issue: D387-95.
TIGRFAMs and Genome Properties in 2013
Haft DH, Selengut JD, Richter RA, Harkins D, Basu MK, Beck E
PMID: 23197656
PloS one. 2013-01-01; 8.5: e63139.
Analyses of the stability and core taxonomic memberships of the human microbiome
Li K, Bihan M, Methé BA
PMID: 23671663
PLoS pathogens. 2013-01-01; 9.6: e1003481.
Host factor SAMHD1 restricts DNA viruses in non-dividing myeloid cells
Hollenbaugh JA, Gee P, Baker J, Daly MB, Amie SM, Tate J, Kasai N, Kanemura Y, Kim DH, Ward BM, Koyanagi Y, Kim B
PMID: 23825958
PloS one. 2013-01-01; 8.12: e56111.
A multi-omic systems-based approach reveals metabolic markers of bacterial vaginosis and insight into the disease
Yeoman CJ, Thomas SM, Miller ME, Ulanov AV, Torralba M, Lucas S, Gillis M, Cregger M, Gomez A, Ho M, Leigh SR, Stumpf R, Creedon DJ, Smith MA, Weisbaum JS, Nelson KE, Wilson BA, White BA
PMID: 23405259
PloS one. 2013-01-01; 8.12: e57182.
investigating acid production by Streptococcus mutans with a surface-displayed pH-sensitive green fluorescent protein
Guo L, Hu W, He X, Lux R, McLean J, Shi W
PMID: 23468929
PloS one. 2013-01-01; 8.12: e54101.
Insular organization of gene space in grass genomes
Gottlieb A, Müller HG, Massa AN, Wanjugi H, Deal KR, You FM, Xu X, Gu YQ, Luo MC, Anderson OD, Chan AP, Rabinowicz P, Devos KM, Dvorak J
PMID: 23326580
Current topics in microbiology and immunology. 2013-01-01; 363.21-41.
Studying Salmonellae and Yersiniae host-pathogen interactions using integrated 'omics and modeling
Ansong C, Deatherage BL, Hyduke D, Schmidt B, McDermott JE, Jones MB, Chauhan S, Charusanti P, Kim YM, Nakayasu ES, Li J, Kidwai A, Niemann G, Brown RN, Metz TO, McAteer K, Heffron F, Peterson SN, Motin V, Palsson BO, Smith RD, Adkins JN
PMID: 22886542