Publications

Journal of computational biology : a journal of computational molecular cell biology. 2005-06-01; 12.5: 497-513.

A tool for analyzing mate pairs in assemblies (TAMPA)

Dew IM, Walenz B, Sutton G

PMID: 15952874

Journal of clinical oncology : official journal of the American Society of Clinical Oncology. 2005-05-20; 23.15: 3526-35.

Molecular staging for survival prediction of colorectal cancer patients

Eschrich S, Yang I, Bloom G, Kwong KY, Boulware D, Cantor A, Coppola D, Kruh酶ffer M, Aaltonen L, Orntoft TF, Quackenbush J, Yeatman TJ

PMID: 15908663

Proceedings of the National Academy of Sciences of the United States of America. 2005-05-17; 102.20: 7315-20.

Patellamide A and C biosynthesis by a microcin-like pathway in Prochloron didemni, the cyanobacterial symbiont of Lissoclinum patella

Schmidt EW, Nelson JT, Rasko DA, Sudek S, Eisen JA, Haygood MG, Ravel J

PMID: 15883371

Infection and immunity. 2005-05-01; 73.5: 2863-72.

Boosting of DNA vaccine-elicited gamma interferon responses in humans by exposure to malaria parasites

Wang R, Richie TL, Baraceros MF, Rahardjo N, Gay T, Banania JG, Charoenvit Y, Epstein JE, Luke T, Freilich DA, Norman J, Hoffman SL

PMID: 15845492

Applied and environmental microbiology. 2005-05-01; 71.5: 2209-13.

Toward a system of microbial forensics: from sample collection to interpretation of evidence

Budowle B, Schutzer SE, Ascher MS, Atlas RM, Burans JP, Chakraborty R, Dunn JJ, Fraser CM, Franz DR, Leighton TJ, Morse SA, Murch RS, Ravel J, Rock DL, Slezak TR, Velsko SP, Walsh AC, Walters RA

PMID: 15870301

Bioinformatics (Oxford, England). 2005-05-01; 21.9: 1782-8.

Efficient implementation of a generalized pair hidden Markov model for comparative gene finding

Majoros WH, Pertea M, Salzberg SL

PMID: 15691859

Plant physiology. 2005-05-01; 138.1: 38-46.

Databases and information integration for the Medicago truncatula genome and transcriptome

Cannon SB, Crow JA, Heuer ML, Wang X, Cannon EK, Dwan C, Lamblin AF, Vasdewani J, Mudge J, Cook A, Gish J, Cheung F, Kenton S, Kunau TM, Brown D, May GD, Kim D, Cook DR, Roe BA, Town CD, Young ND, Retzel EF

PMID: 15888676

Plant physiology. 2005-05-01; 138.1: 18-26.

The institute for genomic research Osa1 rice genome annotation database

Yuan Q, Ouyang S, Wang A, Zhu W, Maiti R, Lin H, Hamilton J, Haas B, Sultana R, Cheung F, Wortman J, Buell CR

PMID: 15888674

Applied and environmental microbiology. 2005-05-01; 71.5: 2530-8.

DNA microarray analysis of nitrogen fixation and Fe(III) reduction in Geobacter sulfurreducens

Meth茅 BA, Webster J, Nevin K, Butler J, Lovley DR

PMID: 15870343

Nature methods. 2005-05-01; 2.5: 345-50.

Multiple-laboratory comparison of microarray platforms

Irizarry RA, Warren D, Spencer F, Kim IF, Biswal S, Frank BC, Gabrielson E, Garcia JG, Geoghegan J, Germino G, Griffin C, Hilmer SC, Hoffman E, Jedlicka AE, Kawasaki E, Mart铆nez-Murillo F, Morsberger L, Lee H, Petersen D, Quackenbush J, Scott A, Wilson M, Yang Y, Ye SQ, Yu W

PMID: 15846361

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