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Publications

Nucleic acids research. 2007-01-01; 35.Database issue: D846-51.
The TIGR Plant Transcript Assemblies database
Childs KL, Hamilton JP, Zhu W, Ly E, Cheung F, Wu H, Rabinowicz PD, Town CD, Buell CR, Chan AP
PMID: 17088284
Genome biology. 2007-01-01; 8.3: R152.
Using comparative genomics to reorder the human genome sequence into a virtual sheep genome
Dalrymple BP, Kirkness EF, Nefedov M, McWilliam S, Ratnakumar A, Barris W, Zhao S, Shetty J, Maddox JF, O'Grady M, Nicholas F, Crawford AM, Smith T, de Jong PJ, McEwan J, Oddy VH, Cockett NE, International Sheep Genomics Consortium
PMID: 17663790
Nucleic acids research. 2007-01-01; 35.Database issue: D224-8.
New developments in the InterPro database
Mulder NJ, Apweiler R, Attwood TK, Bairoch A, Bateman A, Binns D, Bork P, Buillard V, Cerutti L, Copley R, Courcelle E, Das U, Daugherty L, Dibley M, Finn R, Fleischmann W, Gough J, Haft D, Hulo N, Hunter S, Kahn D, Kanapin A, Kejariwal A, Labarga A, Langendijk-Genevaux PS, Lonsdale D, Lopez R, Letunic I, Madera M, Maslen J, McAnulla C, McDowall J, Mistry J, Mitchell A, Nikolskaya AN, Orchard S, Orengo C, Petryszak R, Selengut JD, Sigrist CJ, Thomas PD, Valentin F, Wilson D, Wu CH, Yeats C
PMID: 17202162
Methods in molecular biology (Clifton, N.J.). 2007-01-01; 408.93-108.
Sybil: methods and software for multiple genome comparison and visualization
Crabtree J, Angiuoli SV, Wortman JR, White OR
PMID: 18314579
Genome biology. 2007-01-01; 8.3: R34.
Hawkeye: an interactive visual analytics tool for genome assemblies
Schatz MC, Phillippy AM, Shneiderman B, Salzberg SL
PMID: 17349036
Nature methods. 2007-01-01; 4.1: 35-7.
Sensitive and specific method for detecting G protein-coupled receptor mRNAs
Hansen A, Chen Y, Inman JM, Phan QN, Qi ZQ, Xiang CC, Palkovits M, Cherman N, Kuznetsov SA, Robey PG, Mezey E, Brownstein MJ
PMID: 17115035
Genome biology. 2007-01-01; 8.10: R226.
Surprising complexity of the ancestral apoptosis network
Zmasek CM, Zhang Q, Ye Y, Godzik A
PMID: 17958905
Cytogenetic and genome research. 2007-01-01; 119.3-4: 268-74.
Isolation and characterization of the highly repeated fraction of the banana genome
Hribová E, Dolezelová M, Town CD, Macas J, Dolezel J
PMID: 18253041
Nucleic acids research. 2007-01-01; 35.Database issue: D883-7.
The TIGR Rice Genome Annotation Resource: improvements and new features
Ouyang S, Zhu W, Hamilton J, Lin H, Campbell M, Childs K, Thibaud-Nissen F, Malek RL, Lee Y, Zheng L, Orvis J, Haas B, Wortman J, Buell CR
PMID: 17145706
Journal of bacteriology. 2007-01-01; 189.1: 531-9.
Complete and SOS-mediated response of Staphylococcus aureus to the antibiotic ciprofloxacin
Cirz RT, Jones MB, Gingles NA, Minogue TD, Jarrahi B, Peterson SN, Romesberg FE
PMID: 17085555