Publications

PloS one. 2012-01-01; 7.5: e36427.

Optimizing read mapping to reference genomes to determine composition and species prevalence in microbial communities

Martin J, Sykes S, Young S, Kota K, Sanka R, Sheth N, Orvis J, Sodergren E, Wang Z, Weinstock GM, Mitreva M

PMID: 22719831

Frontiers in immunology. 2012-01-01; 3.302.

Advances in human B cell phenotypic profiling

Kaminski DA, Wei C, Qian Y, Rosenberg AF, Sanz I

PMID: 23087687

Journal of bacteriology. 2012-01-01; 194.2: 545-6.

Whole-genome sequences of Borrelia bissettii, Borrelia valaisiana, and Borrelia spielmanii

Schutzer SE, Fraser-Liggett CM, Qiu WG, Kraiczy P, Mongodin EF, Dunn JJ, Luft BJ, Casjens SR

PMID: 22207749

PloS one. 2012-01-01; 7.5: e44224.

Groundtruthing next-gen sequencing for microbial ecology-biases and errors in community structure estimates from PCR amplicon pyrosequencing

Lee CK, Herbold CW, Polson SW, Wommack KE, Williamson SJ, McDonald IR, Cary SC

PMID: 22970184

Nucleic acids research. 2012-01-01; 40.Database issue: D593-8.

ViPR: an open bioinformatics database and analysis resource for virology research

Pickett BE, Sadat EL, Zhang Y, Noronha JM, Squires RB, Hunt V, Liu M, Kumar S, Zaremba S, Gu Z, Zhou L, Larson CN, Dietrich J, Klem EB, Scheuermann RH

PMID: 22006842

Proceedings of the National Academy of Sciences of the United States of America. 2011-12-20; 108.51: E1417-22.

Fitness costs limit influenza A virus hemagglutinin glycosylation as an immune evasion strategy

Das SR, Hensley SE, David A, Schmidt L, Gibbs JS, Puigb貌 P, Ince WL, Bennink JR, Yewdell JW

PMID: 22106257

Proceedings of the National Academy of Sciences of the United States of America. 2011-12-13; 108.50: 20142-7.

Genomic anatomy of Escherichia coli O157:H7 outbreaks

Eppinger M, Mammel MK, Leclerc JE, Ravel J, Cebula TA

PMID: 22135463

Molecular microbiology. 2011-12-01; 82.6: 1545-62.

Competition among Hfq-binding small RNAs in Escherichia coli

Moon K, Gottesman S

PMID: 22040174

Tissue engineering. Part A. 2011-12-01; 17.23-24: 2911-8.

Antibody-mediated osseous regeneration: a novel strategy for bioengineering bone by immobilized anti-bone morphogenetic protein-2 antibodies

Freire MO, You HK, Kook JK, Choi JH, Zadeh HH

PMID: 21870943

Molecular and biochemical parasitology. 2011-12-01; 180.2: 106-11.

Analysis of transcriptional regulation of tetracycline responsive genes in Brugia malayi

Liu C, Kelen PV, Ghedin E, Lustigman S, Unnasch TR

PMID: 21944995

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